Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPFVPTRSLKERKIDFIEAVLNPNAPKGGLYTLEHFETLEWQDCLGMSYSELVEHVFELLNLEIPKNLLASALKRYENFDNPKNPAPIFALNERLFVQELYHGPSLAFKDMALQPLASLFSNLAVGKNEKYLVLVSTSGDTGPATLEGLAGMPNVFVVCLYPKDGTSLVQKLQMVTQNASNLKVFGVSGDFDDAQNALKNLLKDDDFNEALKARQLKLSVANSVNFGRIAFQIVYHIWGFLELYKKGAINSKEKITLAIPSGNFGNALGAFYAKKMGL------NIAKIKVVTNSN-DVLREFIETGRYDLTKRSLKQTFSPAMDILKSSNVERALFSLFGFERTLELMQALEEEKFYALKPKELALLQEHFSCASCSDEDCLKTIQEVYAEHQYLIDPHTATALNASLKTH--------EKTLVSATASYEKFPKTTLLALNEQKKNDDDKAALETLKNSYNTPDSQRLDDLFERGIKHQEVLKLNEIKSSILLWLENTH |
| 2ZSJ Chain:A ((48-348)) | ---------------------------------------------------------------------------------------------KIYLKYEGLNPTGSFKDRGMTLA---ISKAVEA--GKRAVICASTGNTSASAAAY-AARAGLRAYVLLPKGAVAIGKLSQAMIY-GA--KVLAIQGTFDDALNIVRKIGEN-----------FPVEIVNSVNPYRIEGQKTAAFEICDTLGE-------APDYHFIPVGNAGNITAYWKGFKIYYEEGKITKLPRMMGWQAEGAAPIVKGY----PI----KNPQTIATAIKIGNPYSWKSALKAAQE-------------S---------------GGKIDAVSDSEILYAYKLIASTEGVFCEPASAASVAGLIKLVREGFFKGGEVVTCTLTGNGLKDPDTAIKVCEEPITVPPDFDEVVKVLGF---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ZSJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99313 for 2541 contacts (-39.1/contact) +
2D Compatibility (PS) -30387 + (NN) -7659 + (LL) 14176
1D Compatibility (HY) -5600 + (ID) 2800
Total energy: -131583.0 ( -51.78 by residue)
QMean score : 0.281
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