Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTLFSVYLFLSLNPLFLEAKEITWSQFLENFKNKNEDDKPKPLTIDKNNEKQQILDKNQQILKRALEKSLKFFFIFGYNYSQAAYSTTNQNLTLTANSIGFNTATGLEHFLRNHPKVGFRIFSVYNYFHSVSLSQPQILMVQNYG------GALDFSWIFVDKK----TYRFRSYLGIALEQGVLLVDTIKTGSFTTIIPRTKKTFFQAPLRFGFIVDFIGYLSLQL---GIEMPLVRNVFYTYNNHQERF--KPRFNANLSLIVSF------ |
| 1T8H Chain:A ((4-275)) | MPDIFQQEARGWLRCGAPPFAGA-VAGLTTKHGGESKGPFASLNMGLHVGDDRTDVVNNRRRLAEWLAFPLERWVCCEQVHGADIQKVTKSDRGNGAQD-FATAVPGVDGLYTDEAGVLLALCFADCVPIYFVAPSAGLVGLAHAGWRGTAGGIAGHMVWLWQTREHIAPSDIYVAIGPAIGPCCYTVDDRVVDSLRPTLPPESPLPWRETSPGQYALDLKEANRLQLLAAGVPNSHIYVSERCTSCEEALFFSHRRDRGTTGRMLAFIGRREE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T8H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123727 for 2098 contacts (-59.0/contact) +
2D Compatibility (PS) -26366 + (NN) -9947 + (LL) 256
1D Compatibility (HY) 800 + (ID) 1350
Total energy: -160334.0 ( -76.42 by residue)
QMean score : 0.313
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