Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKVNFFATCLGAAIYSNASLNAIKLLRKENLEVVFKKDQTCCGQPSYNSGYYEETKKVVLYNIKLYSNNDYPIILPSGSCTGMMRHDYLELFE-GHAEFNMVKDFCSRVYELSEFLDKK-----LQVKYEDKGEPLKITWHSNCHALRVAKVIDSAKN----------LIRQLKNVELIEL------EKEEECCGFGGTFSVKEPEISAVMVKEKIKDIESRHVD-----VIVSADAGCL---------------MNISTAMQKMGSLTK--PMHFYDFLASRLGL------------------------------- |
1D3V Chain:A ((6-313)) | KPIEIIGAPFSKGQPRGGVEKGPAALRKAGLVEKLKE-------TEYNVRDHGDLAFVDVPN--DSPFQIVKNPRSVGKANEQLAAVVAETQKNGTISVVLGGDHSMAIGSISGHARVHPDLCVIWVDAHTDINTPLTTSSGNLHGQPVAFLLKELKGKFPDVPGFSWVTPCISAKDIVYIGLRDVDPGEHYIIKTLGIKYFSMTEVDKLGIGKVMEETFSYLLGRKKRPIHLSFDVDGLDPVFTPATGTPVVGGLSYREGLYITEEIYKTGLLSGLDIMEVNPTLGKTPEEVTRTVNTAVALTLSCFGTKREGNHK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D3V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61229 for 1924 contacts (-31.8/contact) +
2D Compatibility (PS) -24635 + (NN) -1791 + (LL) 424
1D Compatibility (HY) -1200 + (ID) 1550
Total energy: -89981.0 ( -46.77 by residue)
QMean score : 0.217
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