Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKGLWLVISLVFVGFLWANESYVFNNSKGRLTEKSVAFIEGVSKELYLKTGVRFAIDMTDFEKNPIALANKKERQSYQEGFLKQLKPPFVVFFFYHDAQKIELVANPKDLLDTDKIFFEKIAPLLPTNAKEYTPQRISAMLINGYSVAVDALAEKYHVNITQNFSAPKGVTFVKVVIYILLLTLLGAFLGLYFFKKS
1QF6 Chain:A ((533-642))
-----------FPTWLAPVQVVIMN-----ITDSQSEYVNELTQKLS-NAGIRVKAD------------LRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSRSLKQLEE----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1QF6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30098 for 830 contacts (-36.3/contact) +
2D Compatibility (PS) -11541 + (NN) -2877 + (LL) 7552
1D Compatibility (HY) -3200 + (ID) 600
Total energy: -40764.0 ( -49.11 by residue)
QMean score : 0.347
(partial model without unconserved sides chains):
PDB file :
Tito_1QF6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QF6-query.scw
PDB file :
Tito_Scwrl_1QF6.pdb
: