Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------MKEKNFWPLGIMSVLIFG----------LGIVVFLVVFALKNSPKNDLVY------FKGHNEVDLNFNAMLK-TYENFKSNYRFSVGLKPLTESPKTPILPYFS-KGTHG-----DKKIQENLLNNALILEKSNTLYAQLQPLKPALDSPN--------IQVYLA-----------FYPSQSQPRLLGTLDCKNACEPLKFDLLEGDKVGRYKILFKF-------VFKNKEELILEQLAFFK---- |
| 4AW9 Chain:A ((1-263)) | GGKHWVVIVAGSNGWYNYRHQADACHAYQIIHRNGIPDEQIVVMMYDDIAYSEDNPTPGIVI--------NRPNGTDVYQGVPKDYTGEDVTPQNFLAVLRGDAEAVKGIGSGKV----LKSGPQDHVFIYFTDHGSTGILVFPNEDLHVKDLNETIHYMYKHKMYRKMVFYIEACESGSMMNHLPDNINVYATTAANPRESSYACYYDEKRSTYLGDWYSVNWMEDSDVEDLTKETLHKQYHLVKSHTQTSHVMQYGNKTISTMKVMQFQGMKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AW9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22802 for 1222 contacts (-18.7/contact) +
2D Compatibility (PS) -19044 + (NN) -4185 + (LL) 1136
1D Compatibility (HY) -10800 + (ID) 2050
Total energy: -57745.0 ( -47.25 by residue)
QMean score : 0.233
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