Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSITIPIVIAFDNHYAIPAGVSLYSMLACAKSENPKSQNPQLQSDNKKLFYKIHCLVDNLSLENQQKLKETLVPFSAFASVDFLDISTPNLYTTSVEPSVIDKIHEAFLQLNIYAKTRFSKMVMCRLFLASLFPQYDKIIMFDADTLFL-----NDVSESFFIPLDSYYFGAAKDFSSPKSLKHFQTEREREPRQKFSLYEHYLKEKDMQIICENHYNVGFLIVNLKLWRADKLEEHLLNLTHQ-K-GQCVFCPEQDLLTL-ACYQ---KVLQLPY-IYNAHPFMANQKRFIPNQQEIIMLHFYFVGKPWILPTALYSKEWHEILLKTPFYAEYSVKFLKQMTECLSLQDKQKTFEFLAPLLNPKTLLEYVFFRLSKIFKRLKERFLNS |
| 2P6W Chain:A ((54-199)) | -------------------------------------------------------------------------------------------------------------------ALHFRRSWIIQQ-AAEKFPSTEWFLWLDSDVYVNPKNKNKPITSFIDLS--DP--NILYHTFHE--------------------------AP---W-GSYPINTGVKFVHKD----ALEIEKIVWSLRNEAPWNTFPY-EQKTVYEYVFPRIPGRYIVHDPYTLNCIVKAYP-----EHVKDALFVHMCGTSRAERDEHMEMV----------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P6W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -65992 for 995 contacts (-66.3/contact) +
2D Compatibility (PS) -14178 + (NN) -4098 + (LL) 18480
1D Compatibility (HY) -2000 + (ID) 700
Total energy: -68488.0 ( -68.83 by residue)
QMean score : 0.264
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