Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKRLRRLRSSENLRAMVRETRLNINDFIAPLFVIESDSGIKNEISSMPGVYQMSIEPLLKECEELVGLGIKAVLLFGIPKHKDATGS----HALNKDHIVAKATREIKKRFKDLIVIADLCFCEYTDHGHCGILENAS--VSNDKTLKILNLQGLILAESGVDILAPSNMMDGNVLSLRKALDKAGYFHTPIMSYSTKFASSYYGPFRDVANSPPSFG-DRKSYQMDYANQKEALLESLEDEKQGADILMVKPALAYLDIVKEIRDHTLLPLALYNVSGEYAMLKLAQKHNLINYESVLLETMTCFKRAGADMIISYHAKEVANLLQRN |
3OBK Chain:H ((22-341)) | ---RPRRNRKNRAVRQLVQENLVKPSSLIYPLFVHDEETSVP--IPSMPGQSRLSMEDLLKEVGEARSYGIKAFMLF--PKVDDELKSVMAEESYNPDGLLPRAIMALKEAFPDVLLLADVALDPYSSMGHDGVVDEQSGKIVNDLTVHQLCKQAITLARAGADMVCPSDMMDGRVSAIRESLDMEGCTDTSILAYSCKYASSFYGPFRDALDSHMVGGTDKKTYQMDPSNSREAEREAEADASEGADMLMVKPGLPYLDVLAKIREKSKLPMVAYHVSGEYAMLKAAAEKGYISEKDTVLEVLKSFRRAGADAVATYYAKEAAKWMVED |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OBK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -213349 for 2657 contacts (-80.3/contact) +
2D Compatibility (PS) -34062 + (NN) -14800 + (LL) 460
1D Compatibility (HY) -21600 + (ID) 6750
Total energy: -290101.0 ( -109.18 by residue)
QMean score : 0.590
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