Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDLRIQSKEVSHNLKELSKTLISYPFEKHVEALGEQCSNFVSIPINNDDYSNICTFVSDFINLIASYNLLESFLDFYKDKLKLSELVTEYANVTNNLLFKKLIKHLSGNNQLVKNFYQCIREIIKYNAPNKEYKPNQFFIIGKGKQKQLAKIYSHLKELSASEIKPQDMEDILKKLEELDKIFKTTDFTKFTPKTEIKDIIKEIDEKYPINENFKRQFNEFESNIEKHDEIKKDFERNKESLIREIENHCKNECNSEEEPEYKINDLLKNIQQICKNYIESHAVNDVSKDIKSMMCQFYLKQIDLLVNSEIVRYRYSNLFEPIQRSLWESIKILDNESGIYLFPKNIGEIKDKFEANKEKFKQSKNVSEFAEYCRECNPYTAFNFHLNINNGLSHQFEKFVPIMKEYKEPKITDNDLEAISTKETGLASQLSGHWFFQLSLFNKTNFNPNKIWIPLEFNKRSKIKFDKDLEIYFDSHESFNISKKYLQEIDQESLKKIKQSKDFFSIQKIESKHDN-----NDILQLEFFENDTSFLFAKGSFAEILEYNMQLKIDSLITKEFNKLLAIVQDSPQDSYQLKIRVRHNNKLPREKYT--------EHEIKLEVYDCRKSHDHNEPIILSQQSTGFQWAFNFMFGFLYNVGSHFSFNHNIIYVMDEPATHLSVPARKEFRKFLKEYAHKNHVTFVLATHDPFLVDTDHLDEIRIVEKETEGSVIKNHFNYPLNNASKDSDALDKIKRSLGVGQHVFHNPQKHRIIFVEGITDYCYLSAFKLYLRYKEYKDNPIPFTFLPISGLKNDSNDMKETIEKLCELDNHPIVLTDDDRKCVFNQQATSERFKRANEEMHDPITILQLSDCDRHFKQIEDCFSANDRNKYAKNKQMELSMAFKTRLLYGGEDAIEKQTKRNFLKLFKWIAWATNLIKN |
3D31 Chain:A ((25-208)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGEYFVILGPTGAGKTLFLELIAGFH--VPDSGRILLD--GKDVTDLSP--EKHDIAFVYQNY--SLFPHMNVKKNLEFGMRMKKIKDPKRVLDTARDLKIEHLL-------DRNPLTLSGGEQQRVALARALVT---------NPKILLLDEPLSALDPRTQENAREMLSVLHKKNKLTVLHITHDQTEAR-IMADRIAVVMD---GKLIQVGKPEEIFEKPVEGRVASFVGFENVLKGRVISAEQGLLRIRVGEVVIDAAGDMEVGDQVYAFLRPENIALSKSSTQSSIRNSLQGRVTEAWVLGALVRVKVDCGVPLNVLITRRSAEEMELSPGVQIYARFKASSVHVLR------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D31.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47075 for 1222 contacts (-38.5/contact) +
2D Compatibility (PS) -17965 + (NN) -5112 + (LL) 40444
1D Compatibility (HY) -2800 + (ID) 1700
Total energy: -34208.0 ( -27.99 by residue)
QMean score : 0.268
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