Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLQRIYLDNNATTRIDPKVKEIMDPFLRDHYGNPSSLHQFGTETHPAIAEALDKLYKGINARDIDDVIITSCATESNNWV-------------LKGVYFDECLKKGKNHIITTVAEHPAVRSTCNFL-ESLGVEVTYLPINE-HGSITADQVKEAITEKTALVSVMWANNETGLIFPIEEIGAICKE----------KGVLFHTDAVQAIGKIPVDVLKANVDFLSFSAHKFHGPKGIGGLYIRSGVG-LTP----LFHGGEHMNGRRSGTLNVPYIVGMGEAMKLAVEHLDYEKEVVGKLRDKLEEALLKIPDVMVVGDRVH---------RVPNTTLISVRGIEGEAMLWDLNRSNIAASTGSACASE-DLEANPVMVAIGASKELAHTAIRLSLSRFNTEAEIDKTIEVFSQAAVRLRNISSSY |
| 3A9X Chain:B ((18-428)) | --RKVYMDYNATTPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKP-QDIIFTSGGTESNNLVIHSTVRCFHEQQTLQ----------TRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDFLTIVGHKFYGPR-IGALYVR-GVGKLTPLYPMLFGGGQERN-FRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLEERL-----EAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQCQTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLE------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A9X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161409 for 3178 contacts (-50.8/contact) +
2D Compatibility (PS) -38730 + (NN) -11587 + (LL) 1216
1D Compatibility (HY) -22800 + (ID) 7250
Total energy: -240560.0 ( -75.70 by residue)
QMean score : 0.533
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