Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTTENTDETHLRETKNKLGRKPKADANKKTRAVSLYFSDEQYQKLEKMANEEEESVGSYIKRYILKALRKIEQGGGFIAFNLFLI
2KKE Chain:A ((1-53))
-----------------MVGRRP-GGGLKDTKPVVVRLYPDEIEALKS-RVPANTSMSAYIRRIILNHLEDE--------------
General information:
TITO was launched using:
RESULT:
Template:
2KKE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 684 for 216 contacts (3.2/contact) +
2D Compatibility (PS) -5736 + (NN) -2648 + (LL) 2192
1D Compatibility (HY) -4400 + (ID) 700
Total energy: -10608.0 ( -49.11 by residue)
QMean score : 0.463
(partial model without unconserved sides chains):
PDB file :
Tito_2KKE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KKE-query.scw
PDB file :
Tito_Scwrl_2KKE.pdb
: