Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --------------------M-SLKFFRKNIVLKVVPRLAFGVL-WLLHK-TCKNRYFL-AQDLKEKPFIVSC-----------WHGELGMIGFAYLRLQ----------KP-SVYVIASQHFDGSIAAGLFESFGFKNIRGSSKKGGVKVLIEGLKRLKEGCDVAITPDGPKGPR------HSIADGVIAL---AQKSGVGISA----CRVVC-KNAWRLNTWDQFEI---PKPFSE-VRYYM--------LESVIIP-KEWELSKAKEYL----KTRMDSV-GFEESQRGLGA--------- |
1W9Y Chain:A ((2-305)) | ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEGVQAEVTDMDWESTFFLKHLPISNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLE-------KGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W9Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60641 for 1399 contacts (-43.3/contact) +
2D Compatibility (PS) -21958 + (NN) -1636 + (LL) 60
1D Compatibility (HY) -4800 + (ID) 2050
Total energy: -91025.0 ( -65.06 by residue)
QMean score : 0.192
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