Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKEILVAYGVDIDAVAGWLGSYG-GEDSPDDISRGLFAGEVGIPRLLKLFKKYHLPATWFAPGHSIETFPEPMKMIVDAGHEVGAHGYSHENPIAMTAKQEEDVLLKSVELIKDLTGKAPTGYVAPWWEFSNITNELLLKHGFKYDHSLMHNDFTPYFVRVGDSWSKIDYSLEAKDWMKPLIRGVETNLVEIPANWYLDDLPPMMFIKKSPNSFGFVSPRDIGQMWIDQFDWVYREMDYAVFSMTIHPDVSARPQVLLMHEKIIEHINQHEGVRWVTFNEIADDFLKRNPRKK |
3RXZ Chain:A ((22-286)) | -GKTCAVAFTFDVDAESPLLTTDPAFADRMGTMSHQAYGPLVGVPRLLGILDEFNVPGTFFVPGYTAHRHPEPIRSIARAGHEIAHHGYLHESLVGADEDTERKILTRGIEALEEVAGVHPVGYRAPMWEMNWHTPKLLAEFGFLYDSTLMDS-DHPYELAVG-----------------------DGSLVELPVSWALDDWQQYCFVPDFSGTGLIETPAKAIELWRAELNAMRDI--GGAWVLTNHPFLSGRPGRAAALREFIAEVCAMDDVWVAGMSQIAEHVRAQKLTPR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RXZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144098 for 2292 contacts (-62.9/contact) +
2D Compatibility (PS) -28316 + (NN) -12578 + (LL) 1744
1D Compatibility (HY) -14400 + (ID) 3900
Total energy: -201548.0 ( -87.94 by residue)
QMean score : 0.468
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