Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDILKTLQKHLGDVETSDFKTNAIEKSQQIAKFSRDMKNINESVGALQVLQIACKKLLNKSMGLEDKDA----------------LQASIIKQELREIVENCQFLASPLFDTQLNIAINDEVFSMIVDNPLNLLENVGGFQAYLEEKLNEIKELLGYLSESLSNPKAFMPKQSFSNKSLKDLLSDDLRA |
2D4X Chain:A ((50-139)) | -----------------------VVLSQAQAQNSQYALARTFATQKVSLEESVLSQVTTAIQTAQEKIVYAGNGTLSDDDRASLATDLQGIRDQLMNLANSTDGNGRYIFAGYKTEAAPFDQATGGYHGGEKSVTQQVDSARTMVIGHTGAQIFNSITSNAVPEPDGSDSEKNLFVMLDTAIAALKTPV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D4X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2510 for 356 contacts (-7.1/contact) +
2D Compatibility (PS) -8091 + (NN) -5662 + (LL) 1516
1D Compatibility (HY) 2400 + (ID) 400
Total energy: -12747.0 ( -35.81 by residue)
QMean score : 0.467
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