Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRADNRFKEIPIIMITTEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEVVLGTND
2FMH Chain:A ((6-124))
LKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGG-FGFIISDWNMPNMDGLELLKTIRADSAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFEKLG
General information:
TITO was launched using:
RESULT:
Template:
2FMH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65550 for 931 contacts (-70.4/contact) +
2D Compatibility (PS) -13083 + (NN) -7822 + (LL) -76
1D Compatibility (HY) -14400 + (ID) 2950
Total energy: -103881.0 ( -111.58 by residue)
QMean score : 0.766
(partial model without unconserved sides chains):
PDB file :
Tito_2FMH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FMH-query.scw
PDB file :
Tito_Scwrl_2FMH.pdb
: