Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKILVIQGPNLNMLGHRDPRLYGMVTLDQIHEIMQTFVKQGNLDVELEFFQTNFEGEIIDKIQESVGSDYEGIIINPGAFSHTSIAIADAIMLAGKPVIEVHLTNIQAREEFRKNSYTGAACGGVIMGFGPLGYNMALMAMVNILAEMKAFQEAQKNNPNNPNNPINNQK
2WKS Chain:D ((1-153))
MKILVIQGPNLNMLGHRDPRLYGMVTLDQIHEIMQTFVKQGNLDVELEFFQTNFEGEIIDKIQESVGSDYEGIIINPGAFSHTSIAIADAIMLAGKPVIEVHLTNIQAREEFRKNSYTGAACGGVIMGFGPLGYNMALMAMVNILAEMKAFQE-----------------
General information:
TITO was launched using:
RESULT:
Template:
2WKS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122779 for 1207 contacts (-101.7/contact) +
2D Compatibility (PS) -17153 + (NN) -6415 + (LL) -344
1D Compatibility (HY) -24400 + (ID) 7650
Total energy: -178741.0 ( -148.09 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_2WKS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WKS-query.scw
PDB file :
Tito_Scwrl_2WKS.pdb
: