Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLDQLEVSHDADSLCVVIEISKHSN-IKYELDKESGALMVDRVLYGAQNYPANYGFVPNTLGSDGDPVDALVLSDVAFQAGSVVKARLVGVLNMEDESGMDEKLLALPIDKIDPTHSYVKDIDDLSKHTLDKIKHFFETYKDLEPNKWVKVKGFENKESAIKVLEKAIKAYQG
3D53 Chain:C ((3-170))
-FIKKIKAKANNNEINVIIEIPMNSGPIKYEFDKESGALFVDRFMQTTMSYPCNYGFIPDTLSNDGDPVDVLVVAHHPVVPGSVIKCRAIGVLMMEDESGLDEKIIAVPTSKLDITFDHIKELDDLCEMLKKRIVHFFEHYKDLEKGKWVKVTGWGDKVKAETLIKEGIDRN--
General information:
TITO was launched using:
RESULT:
Template:
3D53.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -70187 for 1261 contacts (-55.7/contact) +
2D Compatibility (PS) -17767 + (NN) -4453 + (LL) 416
1D Compatibility (HY) -16800 + (ID) 4050
Total energy: -112841.0 ( -89.49 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_3D53.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3D53-query.scw
PDB file :
Tito_Scwrl_3D53.pdb
: