Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEFCVLFGGASFEHEISIVSAIALKGVLKDRIKYFI--FLDENHYFYLIEESNMHSKYFAQIKEKKLPPLILTH----NGLLKNSFLGAKIIELPLVINLVHGGDGEDGKLASLLEFYRIAFIGPRVEASVLSYNKYLTKLYAKDLGVKALDYVLLNEKNRANALDLIGFNFPFIVKPSNAGSSLGVNVVKEEKELIYALDSAFEYSKEVLIEPFIQGVKEYNLAGCKIKKGFCFSYVEEPNK-QEFLDFKQKYLDF-SR-TK-APKANLSNALEEQLKENFKKLYNDLFDGAIIRCDFFVI-ENEVYLNEINPIPGSLANYLF--------DDFKTTLENLAQ-SLPKTPKIQVKNSYLLQIQKNK |
| 3SE7 Chain:A ((4-342)) | MKIGIIFGGVSEEHDISVKSAREVATHLGTGVFEPFYLGITKSGAWQLCDGPGENWEDG------NCRPAVLSPDRSVHGLLVLEQGKYETIRLDLVLPVLHGKLGEDGAIQGLLELSGIPYVGCDIQSSALCMDKSLTYLVARSAGIATPNFWTVTADEKIP---TDQLTYPVFVKPARSGSSFGVSKVAREEDLQGAVEAAREYDSKVLIEEAVIG-TEIGCAVMGNGPELITGEVDQITLS-------------GSDNSAVTVPADISTTSRSLVQDTAKAVYRALGCRGLSRVDLFLTEDGKVVLNEVNTFPGMTSYSRYPRMMTAAGLSRADVIDRLVSLALA------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SE7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154108 for 2538 contacts (-60.7/contact) +
2D Compatibility (PS) -33716 + (NN) -18568 + (LL) 3744
1D Compatibility (HY) -16800 + (ID) 4150
Total energy: -223598.0 ( -88.10 by residue)
QMean score : 0.453
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