Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------MEGLFVAPVLAI----LGAISADEMEKKRDDAKAYYSQVEVAVKKADVVIDNLQAVKK-----MADLFTR---QITKFDALFFLLSQDAIATMKKHHYDTSRYNQKEKDQLCVTV-----STLFSLSAFLKAPIMDKHQKLNKKAQKALNLMRDQMDSLENGNYSLDGIRFRQAQLKDLRDDKTS-------- |
| 2YVS Chain:A ((1-219)) | MEVHAADQYLVAPGEADLLEVHARLAGTGLFPPFPPVELPGGVGGLVARGGFAQTFFFPAEVLGLTFRTPKGRRVRAGGVVVKNVQGYDLVRLFVGSFGLLGRAEEVVLRLRPGRAQAFLRRPFSGSFPRLVPTPRFLFALEDEEGPWLYAYHFGHPKEVERFREAFGGEEARPLDLRPRFPRGLGLGEGPLWDLRFRYQDGGASPPPPPAFLRLARVL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YVS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5826 for 1202 contacts (-4.8/contact) +
2D Compatibility (PS) -16981 + (NN) 5293 + (LL) 0
1D Compatibility (HY) -4400 + (ID) 1150
Total energy: -23064.0 ( -19.19 by residue)
QMean score : 0.100
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