Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTVIFVAVLQAALGMLSVRQEICRNPSQ-PHDFKSLVIVTNFY-----
1ZFU Chain:A ((1-40))
---------GFGCNGPWDEDDMQCHNHCKSIKGYKGGYCAKGGFVCKCY
General information:
TITO was launched using:
RESULT:
Template:
1ZFU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15937 for 174 contacts (-91.6/contact) +
2D Compatibility (PS) -3538 + (NN) 1983 + (LL) 1448
1D Compatibility (HY) 800 + (ID) 200
Total energy: -15444.0 ( -88.76 by residue)
QMean score : 0.055
(partial model without unconserved sides chains):
PDB file :
Tito_1ZFU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZFU-query.scw
PDB file :
Tito_Scwrl_1ZFU.pdb
: