Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRFLNNKHREKGLKAEEEA---CGFLKTLGFEMI-------ERNF--FSQFGEIDIIALKKGVLHFIEVKSG-E-NFDPIYAITPSKLKKMIKTIRCYLSQKDPNSDFCIDALIVKNGKFELLENITF
2FCO Chain:A ((30-127))
-----------GMTLEDDLNATNEYYRERGIAVIHKKPTPV----AYFRQASTTDYNGVYRGKYIDFEAKETKNKTAFPLKNFHAHQIRHMEQVVAHGGICFAILRFSLLNETYLLDASHLIAWWNKQ
General information:
TITO was launched using:
RESULT:
Template:
2FCO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9867 for 326 contacts (-30.3/contact) +
2D Compatibility (PS) -7317 + (NN) -3165 + (LL) 1088
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -21861.0 ( -67.06 by residue)
QMean score : 0.207
(partial model without unconserved sides chains):
PDB file :
Tito_2FCO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FCO-query.scw
PDB file :
Tito_Scwrl_2FCO.pdb
: