Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKISCLLLVISLFGGFLNASSLYEKLVNKETISVGTEGIYPPFTYHDKEGKLTGYDVEVARELAKELGVKIKFHETSWDIMLTGLKSGRFDMVANQVSLTTKKRQAAFDKSLPYSYSGTIMLVRKDENRIKDIRDIKGLKAANTLSSTYGEIAFKYD--AQIVSVDSMAQALLLVAQKRADLTLNSSLAILNYLNTHKNSPFKIAWESKEKDGGASFVINKHQEKALELINQAMRRLINKGVLKRLGEQFFGKDVSQP
3H7M Chain:A ((7-232))
--------------------------RDRHRTIVVGGDRDYPPYEFIDQNGKPAGYNVELTRAIAEVMGMTVEFRLGAWSEMFSALKSGRVDVLQ-GISWSEKRAR-QIDFTPPHTIVYHAIFARRDSPPAAGLEDLRGRKVALHRDGIMHEYLAERGYGKDLVLTPTPADALRLLAAGGCDYAVVAMVPGMYIIRENRLTNLVPVARSI-AAQRYGYAVRQGDAELLARFSEGLAILRKTGQYEAIRAKWLGVLEP--
General information:
TITO was launched using:
RESULT:
Template:
3H7M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86743 for 1871 contacts (-46.4/contact) +
2D Compatibility (PS) -24579 + (NN) -14111 + (LL) 2512
1D Compatibility (HY) -11200 + (ID) 2450
Total energy: -136571.0 ( -72.99 by residue)
QMean score : 0.504
(partial model without unconserved sides chains):
PDB file :
Tito_3H7M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H7M-query.scw
PDB file :
Tito_Scwrl_3H7M.pdb
: