Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAHILVSGATSGFGLEIAKAFLQKNHVVFGTGRRQENLQKL-----QLAYPKRFIPLCFDLQNKPETKRAIETIFSMTDRIDALINNAGLALGLNKAYECELDDWEVMIDTNIKGLLHLTRLILPSMIEH--DQGTIINLGSIAGTYAYPGG--NVYGASKAFVKQFSLNLRADL--AGTNIRVSNVEPGLCGETEFSMVRFKGDKIKAQSVYENTLYLKPQDIANIVLWIYEQPSHVNINRIEIMPTSQTFAPLPTHKNP
1XG5 Chain:C ((36-277))
----LVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARP-DTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVV-ETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTPAHIQIGDIQMRPTGS-----------
General information:
TITO was launched using:
RESULT:
Template:
1XG5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113002 for 1910 contacts (-59.2/contact) +
2D Compatibility (PS) -24814 + (NN) -6852 + (LL) 1080
1D Compatibility (HY) -14400 + (ID) 4050
Total energy: -162038.0 ( -84.84 by residue)
QMean score : 0.462
(partial model without unconserved sides chains):
PDB file :
Tito_1XG5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XG5-query.scw
PDB file :
Tito_Scwrl_1XG5.pdb
: