Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKTETYPRLLADIGGTNARFGLEVAPRQIEC-------VEVLRCE------DFES----LSDAVRFYLSKCKESLKLHPIYGSFAVATP-IMGDF--VQ-MT-N--N-HWT-FSIET-TRQCLN-------LKKLLVINDFVAQAYAISAMQENDLAQIGGIKCEINAPKAILGPGTGLGVSTLIQNSD-GSLKVLPGEGGHVSFAPF-DDLE-------------ILVWQYARSKFNHVSAERFLSGSGLVLIYEALSKRKGLE-K-------VAK---------------L-SKAELTPQIISER----ALNGD-----YPICRLTLDTFCSMLGTLAADVALTLG------ARG-GVYLCGGIIPRFIDYFKTSPFRARFETKGRMGAFLASIPVHVVMKKTPGLDGAGIALENYLLHDRI |
| 3F9M Chain:A ((73-462)) | --GSEVGDFLSLDLGGTNFRVMLVKVG-E---QWSVKTKHQMYSIPEDAMTGTAEMLFDYISECISDFLDKHQMKHKKLPLGFTFSFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMD-VVAMVNDTVATMISCYYED--------------HQCEVGMIVGTGCNACYMEEMQNVELVE---GDEGRMCVNTEWGAFGDSGELDEFLLEYDRLVDESSANP-GQQLYEKLIGGKYMGELVRLVLLRLVDENLLFHGEASEQLRTRGAFETRFVSQVESDTGDRKQIYNILSTLGLRPS-TTDCDIVRRACESVSTRAAHMCSAGLAGVINRMRESRSEDVMRITVGVDGSVYKLH-PSFKE-RFHASVRRLT--P-S-CEITF--IESEEGSGRGAALVSAVACK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F9M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144606 for 2349 contacts (-61.6/contact) +
2D Compatibility (PS) -31254 + (NN) -4891 + (LL) 3040
1D Compatibility (HY) -1600 + (ID) 2400
Total energy: -181711.0 ( -77.36 by residue)
QMean score : 0.358
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