Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNISVNPYLMAVVFVVFVLLLWAMNVWVYRPLLAFMDNRQAEIKDSLAKIKTDNTQSVEIGHQIETLLKEAAEKRREMLAEAIQKATESYDAVIKQKENELNQEFEAFAKQLQNEKQILKEQLQAQMTVFEDELNKRVAMGLGS
3RYF Chain:E ((61-124))
-------------------------------------------------------------YQEAELLKHLAEKR-EHEREVIQKAIEENNNFIKMAKEKLAQKMESNKENREAHLAAMLERLQEKDKHAEEVRKNKELKEEAS
General information:
TITO was launched using:
RESULT:
Template:
3RYF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 10286 for 247 contacts (41.6/contact) +
2D Compatibility (PS) -7690 + (NN) -8133 + (LL) 6100
1D Compatibility (HY) -800 + (ID) 1150
Total energy: -1387.0 ( -5.62 by residue)
QMean score : 0.652
(partial model without unconserved sides chains):
PDB file :
Tito_3RYF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3RYF-query.scw
PDB file :
Tito_Scwrl_3RYF.pdb
: