Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFSVLTLFPQLILPYFEDSILKRALEKNLFELEVLNLRDFSANKYQKADHTLIGGGAGQILDPEMIENALHSVKN-PKHTIFLSAVGKPFKQIDAMRLAQKKHVVLVCGRYEGFDERSIELG----ADEVFCIGDFILTGGELGALCLIDSIARHIQGVLGNAQSLENESFEN-NYLETPNFANAVFKSKEINKIPAPLEYSKGNHAKIKQLKLDLSKLRTKFYRLDLFKQHKS
3QUV Chain:A ((5-231))
MKIDVVTIFPEYLQ-PVRQSLPGKAIDAGLVDVAVHDLRRWTHDVHKSVDDSPYGGGPGMVMKPTVWGDALDEICTSETLLVVPTPAGYPFTQETAWQWSTEDHLVIACGRYEGIDQRVADDAATRMRVREVSIGDYVLNGGEAAALVIIEAVLRLVPGVLGN-----------ASLLEGPSYTRP-P---SWRGMDVPPVLLSGDHAKIAAWRAEQSRQRTIERRPDLL-----
General information:
TITO was launched using:
RESULT:
Template:
3QUV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -137527 for 1484 contacts (-92.7/contact) +
2D Compatibility (PS) -22461 + (NN) -7134 + (LL) 1084
1D Compatibility (HY) -14000 + (ID) 3300
Total energy: -183338.0 ( -123.54 by residue)
QMean score : 0.447
(partial model without unconserved sides chains):
PDB file :
Tito_3QUV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QUV-query.scw
PDB file :
Tito_Scwrl_3QUV.pdb
: