Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLEDYAISLEEV--NFNDFIVVDVRELDEYEELHLPNATLISVN-DQEKLADFLSQHKDQKVLLHCRAGRRALDAAKSMHELGYTPYYLEGNVYDFEKYGFRMVYDDTSLSDKKN
3GK5 Chain:A ((101-199))
---YRSINAADLYENIKAYTVLDVREPFELIFGSIANSINIPISELREKWKIL---ERDKKYAVICAHGNRSAAAVEFLSQLGLNIVDVEGGIQSWIEEGYPVVL----------
General information:
TITO was launched using:
RESULT:
Template:
3GK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65689 for 702 contacts (-93.6/contact) +
2D Compatibility (PS) -10672 + (NN) -2700 + (LL) 748
1D Compatibility (HY) -6400 + (ID) 1200
Total energy: -85913.0 ( -122.38 by residue)
QMean score : 0.580
(partial model without unconserved sides chains):
PDB file :
Tito_3GK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GK5-query.scw
PDB file :
Tito_Scwrl_3GK5.pdb
: