Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSIGSMGKPIEGFLVAAIQFPVPIVNSRKDIDHNIESIIRTLHATKAGYPGVELIIFPEYSTQGLNTAKWLS-----EEF-LLDVPGKETELYAKACKEAKVYGVLSIMERNP-DSNENPYNTAIIIDPQGKIILKYRKLFPWNPI-----------E--PWYPGDLGMPVCEGPGGSKLAVCICHDGMIPELAREAAYKGCNVYIRISGYSTQV----------NDQWILTNRSNAWHNLMYTVSVNLAGYDNVFYYFGEGQICNFDGTTLVQGHRNPWEIVTGEIYPKMADNARLSWGLENNIYNLGHRGYVAKPGGEHDAGLTYIKDLAAGKYKLPWEDHMKIKDGSIYGYPTTGGRFGK |
| 1UF5 Chain:A ((2-284)) | -----------RQMILAVGQQGPIAR--AETREQVVVRLLDMLTKAAS--RGANFIVFPELALTTFFPRWHFTDEAELDSFYETEMPGPVVRPLFEKAAELGIGFNLGYAELVVEGGVKRRFNTSILVDKSGKIVGKYRKIHLPGHKEYEAYRPFQHLEKRYFEPGDLGFPVYDVD-AAKMGMFIANDRRWPEAWRVMGLRGAEIICGGYNTPTHNPPVPQHDHLTSFHHLLSMQAGSYQNGAWSAAAGKAGMEENCMLLGHSCIVAPTGEIVALTTTLEDEVITAAVDLDRCRELREHIFNFKQHRQPQHYGLIAEL---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UF5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158023 for 2270 contacts (-69.6/contact) +
2D Compatibility (PS) -27894 + (NN) -18136 + (LL) 1660
1D Compatibility (HY) -6800 + (ID) 2550
Total energy: -211743.0 ( -93.28 by residue)
QMean score : 0.523
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