Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKKIFLLEDDYLLSESIKEFLEHLGYEVFCAFNGKEAHERLSVERFNLLLLDVQVPEMNSLELFKRIKNDFLI--STPVIFITALQDNATLKNAFNLGASDYLKKPFDLDELEARIKRFFNDDPIEIMPNIFYHQHALNVKGKKEILAPKTAQLLEYFLEHKGQIISSQALENNLWEQAIDDSTLRTYIKVLRKLLGKNCIETHKGVGYRFNPL
1SRR Chain:C ((2-119))
MNEKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMK---VIDENIRVIIMTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLK-------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1SRR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99424 for 919 contacts (-108.2/contact) +
2D Compatibility (PS) -12645 + (NN) -5107 + (LL) 6668
1D Compatibility (HY) -11600 + (ID) 1950
Total energy: -124058.0 ( -134.99 by residue)
QMean score : 0.771
(partial model without unconserved sides chains):
PDB file :
Tito_1SRR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SRR-query.scw
PDB file :
Tito_Scwrl_1SRR.pdb
: