Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIFSKLIGLFSHDIAIDLGTANTIVLVKGQG-III--------NEPSIVAVRMGLFDSKAYDILAVGSEAKEMLGKTPNSIRA--IR------------------PM-----KDG-------------VIADYDITAKMIRYFIEKAHKRKTWIRPRIMVCVPYGLTSVERNAVKESALSAGAREVFLIEEPMAAAIGAGLPVK-------EPQGSLIVDIGGGTTEIGVISLGG--L---VISKSIRVAGDKLDQSIVEYIRKKFNLLI-------------GERTGEEIKIEIGCAIKLDPPLTMEVSGRDQVSGLLHTIELSSDDVFEAIKDQVREISSALRSVLEEVKPDLVRDIVQNGVVLTGGGALIKGLDKYLSDMVKLPVYVGDEPLLAVAKGTGEAIQDLDLLSRVGFSE |
| 3D2F Chain:A ((2-384)) | ----------STPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPK--------NRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNA----PFSV--ESVMNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQAKLS--AEEVD-FVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSPTLRVRPFK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D2F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165714 for 2618 contacts (-63.3/contact) +
2D Compatibility (PS) -34176 + (NN) -13304 + (LL) 1432
1D Compatibility (HY) -6400 + (ID) 3100
Total energy: -221262.0 ( -84.52 by residue)
QMean score : 0.465
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