Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRATAIKIFSFSSALALLLQGCLSINLKQMLPEIRTYDLNASSFEMTQCPKPLTEVRLISILSADLFNTKEIVFKAQDGQITHGKHQKWIDLPRNMLKTMFMQEAQKACLGVALPPYGAGAPTYAVRFTILSFSL------LEKENSTYRAEFALGYDISVKGDSHSGVIIKHENISSLENKTTKTSKNGSQDFQESAIQSLQHVSTQAMQEAISLIKKAVEAQSVSPLKK------------ |
4MT5 Chain:A ((1-184)) | MQTAYVKYVDDTTG-----------------ETLRQDDLHGYTDETIP------------------YSTAEGIKKYEG----DGYVLVSDGFKPGT-------------------KFGVGTPTYEVHFKHGMTHTDATDKNAEQKTVTETIHYVDENNQTVQPDSTTAVTFKRGYTTDNVTGKVVSYDPWTVDGNQADSKTFAAVPSPAV-EGYTPNHQQINEFTVTPDSKDIVKTVVYVGDP |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4MT5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -8187 for 1022 contacts (-8.0/contact) +
2D Compatibility (PS) -16954 + (NN) 1847 + (LL) 5572
1D Compatibility (HY) 1200 + (ID) 1550
Total energy: -18072.0 ( -17.68 by residue)
QMean score : 0.210
|
|
|