Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MHTVLQIGAGGVGSVVAHKMGMNRDVFKNII-LASRSLDKCHAIKESMLKKGLGEIGVEQVDADDTQALIALIQKHKPKVVVNVALPYQDLTIMQACLETKTHYIDTANYEHPDLAKFEYKEQWAFDKAYKEAGILGVLGAG--FDPGVTNAYVAHAQRHHFDTIHTLDILDCNAGDHKRPFATNFNPEINLREVSSKGRYYENGKWIETKPLEIKQVWAYPQIGEMDSYLLYHEELESLVKNVKGLRRARFFMTFSQNYLTHMKCLENVGMLGIKEIEHQGVKIVPIQFLKTLLPDPESLAKDTTGKTNIGCYMTGIKNNQDKTLYIYNVCDHKKCYEEVGSQAISYTTGVPAMCAAKMICNDTWSVEHFKAGVFNVEELNTDPFMEELIKQGLPYEVIER |
3EUW Chain:A ((4-151)) | TLRIALFGAGRIGHVHAANIAANPD--LELVVIADPFIEGAQRLAEANG------AE-----AV--ASPDEVFARDDIDGIVIGSPTSTHVDLITRAVERGIPAL-CEKPID-----LDIEMVRACKEKIGDGASKVMLGFNRRFDPSFAAIN-ARVANQEIGNLEQLVIISRDPAPAPKDYIAGSGGIFRDMTIHDLDMARFFVPNIVEVTATGANVFSQEIAEFNDYDQVIVTLRGSKGELINIVNSRHCSYGYDQRLEAFGSKGMLAADNIRPTTVRKHNAESTEQADPIFNFFLERYDAAYKAELATFAQGIRDGQGFSPNFEDGVIALELANACLESAQTGRTVTLNPA------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EUW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73212 for 1034 contacts (-70.8/contact) +
2D Compatibility (PS) -14619 + (NN) 281 + (LL) 3516
1D Compatibility (HY) -4000 + (ID) 1100
Total energy: -89134.0 ( -86.20 by residue)
QMean score : 0.385
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