Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVICKHYTPLDIASQAIRTCWQSFEYSDDGGCKDRDLIHRVGNIFRHSSTLEHLYYNFEIKGLSRGALQELSRHRIASLSVKSSRYTLRELKEVESFLPLNETNLERAKEFLVFVDDEKVNEMSVLALENLRVLLS-----EHNIKNDLAKYAMPESYKTHLAYSINARSLQNLLTLRSSNKALKEMQDLAKALFDALPYEHQYLFEDCLKH
3FNN Chain:A ((38-238))
---------AEALVEFAGRACYETFDKPNPRTASNAAYLRHI-MEVGHTALLEHANATMYIRGISRSATHELVRHRHFSFSQLSQ---------SEVVVPTLIDEDPQL--------RELFMHAMDESRFAFNELLNALEEKRKKQARQAARAVLPNATESRIVVSGNFRTWRHFIGMRASEHADVEIREVAVECLRKLQVAAPTVFGDFEIE
General information:
TITO was launched using:
RESULT:
Template:
3FNN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56359 for 1268 contacts (-44.4/contact) +
2D Compatibility (PS) -19458 + (NN) -9483 + (LL) 2728
1D Compatibility (HY) -3600 + (ID) 1950
Total energy: -88122.0 ( -69.50 by residue)
QMean score : 0.335
(partial model without unconserved sides chains):
PDB file :
Tito_3FNN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FNN-query.scw
PDB file :
Tito_Scwrl_3FNN.pdb
: