Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLVTRFKKAFISYSLGVLVVSLLLNVCNASAQEVKVKDYFGEQTIKLPVSKIAYIG-SYVEVPAMLNVWDRVVGVSDYAFKDDIVKATLKGEDLKRVKHMSTDHTAALNVELLKKLSPDLVVTFVGN--PKAVEHAKKFGISFLSFQ--ETTIAEAMQAMQAQATVLEID--ASKKFAKMQETLDFIAERLKGVKKKKGVELF-H-K--ANKISGHQAISSDILEKGGIDNFGLKYVKFGRADISVEKIVKENPEIIFIWWVSP-LTPEDVLNNPKFSTIKAIKNKQVYKLPT--MDIGGPRAPLISLFIALKAHPEAFKGVDINAIVKDYYKVVFDLNDAEIEPFLWH |
| 2R7A Chain:A ((2-256)) | ------------------------------------------------AERIVVAGGSLTELIYAMGAGERVVGVDETTSYPP---------ETAKLPHIGY--WKQLSSEGILSLRPDSVITWQDAGPQIVLDQLRAQKVNVVTLPRVPATLEQMYANIRQLAKTLQVPEQGDALVTQINQRLERVQQNVAAKKAPVKAMFILSAGGSAPQVAGKGSVADAILSLAGAENVATH---QQYKSYSAESLIAANPEVIVVTSQMVDGDINRLRSIAGITHTAAWKNQRIITVDQNLILGMGPRIADVVESLHQQLWPQ-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R7A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109397 for 1934 contacts (-56.6/contact) +
2D Compatibility (PS) -26405 + (NN) -15386 + (LL) 8112
1D Compatibility (HY) -8400 + (ID) 2050
Total energy: -153526.0 ( -79.38 by residue)
QMean score : 0.562
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