Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLIARFKKALISYSLGVLLVSSLLGVANASNQEIQVKDYFGEQTIKLPVSKIIYLG-SFAEVPAMFNTWDRVVGISDYAFKSDIVKATLKDPERIKPMSSDHVAALNVELLKKLSPDLVVTFVGN-PKAVEHAKKFGISFLSFQE--KTIVEVMEDIDAQAKALEV--DASKKLAKMQETLDFIKERLKNVKKKKGVEL--F-HKANKISGHQALDSDILEKGGIDNFGLKYV--------KFGRADISVEKIVKENPEIIFIWWISP----LSPEDVLNNPKFSTIKAIKNKQVYKLPTMDI---GGPR-APLISLFIALKAHPEAFKGVDINAIIKDYYKVVFDLNDAEVEPFLWH |
| 3LHS Chain:A ((5-294)) | ------------------------------ASTISVKDENGTVKVPKDAKRIVVLEYSFADALAALDVK--PVGIADDGKKKRIIKPVREKIGDYTSVGT--RKQPNLEEISKLKPDLIIADSSRHKGINKELNKI-APTLSLKSFDGDYKQNINSFKTIAKALNKEKEGEKRLAEHDKLINKYKDEIKFD-RNQKVLPAVVAKAGLLAHPNYSYVGQFLNELGFKNALSDDVTKGLSKYLKGPYLQLDTEHLADLNPERMIIMTDHAKKDSAEFKKLQEDATWKKLNAVKNNRVDIVDRDVWARSRGLISSEEMAKELVELSKKEQ------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LHS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87493 for 2157 contacts (-40.6/contact) +
2D Compatibility (PS) -28892 + (NN) -14258 + (LL) 5296
1D Compatibility (HY) -4000 + (ID) 2700
Total energy: -132047.0 ( -61.22 by residue)
QMean score : 0.443
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