Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGQLKGLPVEDGFRMPGEYEPHIGCFMIWPERPDNWRLGGKPAQQNYKEVAVAISNFEPVTMFVSPNQYK-NARK---------ELPDTIRVIEMSNDDAWIRDYGPSFLVDDK---GDMRGVDWGFNAWGGLLDGLYFPWDKDNQIAKKVCELERIDYYSQKDFILEGCSIHVDGEGTLVTTEECLLSEGRNPNLTKIEIEQTLKKYFHAQKVIWLKHGFYLDETNGHVDNIFNFVAPGEVVLSWTDNKSDPQYEISRECYDILANKTDAKGRTFIIHKLHCPDPVLITQTESEGVEAINGTFPRQAGDRLAASYVNYYTANGAIIFPLFDDPKDKDAQELLEKLYPDRKIVGIKAREILLGGGNIHCITQHLPDKSTIRE |
| 1XKN Chain:A ((2-348)) | --------SEPTYFMPPEWAPHASTWLSWPHKLESWPGKFEPVPAVFAELAYQLSRSETVNINVLDDAMEAQARELLKERDPEGKYAERIVFHRIPTNDAWCRDHGPNYVIRTQDGRRDKVIMNWEYNAWGGK----YEPYDDDNAVPERVAKAQGLPMV-STGMVLEGGAIDVNGAGLLLTTTACLLNPNRNPSLGKAEIEAQLRRYLGIEKVLWLGDGIAGDDTDGHVDDMARFVNENTVVIAVEEDPEDENYKPLRENYELLKTMTGLDGKPLNIVKLPMPEPVYY------------------DGERLPASYANFYIANTVVLVPTYRCPRDQQAIDILQQCFPKREVVGIDCSDLIWGLGAIHCVTHEEPAML---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XKN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -182971 for 2974 contacts (-61.5/contact) +
2D Compatibility (PS) -37153 + (NN) -23860 + (LL) 1684
1D Compatibility (HY) -28000 + (ID) 5900
Total energy: -276200.0 ( -92.87 by residue)
QMean score : 0.491
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