Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARKYEIMYIIRPNIEEDEKKAVVERFDGILTENGAEIIESKEWGKRRLAYEINDYRDGFYHIVKLNADKADSINEFDRLAKISDDIIRHMVIKEEA
3R3T Chain:A ((3-97))
AMRKYEIMYIIRPGVEEEAQKALVERFAGVLTNNGAEIINTKEWGKRRLAYEINDLREGFYMILNVNAN-AEAINEFDRLAKINEDILRHIVVKEE-
General information:
TITO was launched using:
RESULT:
Template:
3R3T.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14011 for 372 contacts (-37.7/contact) +
2D Compatibility (PS) -9682 + (NN) -1292 + (LL) 208
1D Compatibility (HY) -12800 + (ID) 3400
Total energy: -40977.0 ( -110.15 by residue)
QMean score : 0.384
(partial model without unconserved sides chains):
PDB file :
Tito_3R3T.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R3T-query.scw
PDB file :
Tito_Scwrl_3R3T.pdb
: