Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFSILMAIIQITGIFIAIQILTNKVFSIKEGLVTIAIAMLAFPLFTLVQYWSMIFVLIVFVSALYWKNKNVVVSASITLVVIILLTISDSIVGFILVPGLNFKYDEIFNELLPTLIYCAGMLANLLVFSFLLRKLIEKVNISRFVEHRKYAYIIFSIVALTVLAFYMNIYAGSIAGFDGSVLKINTLIFTGYTILLIVIVTVVINTATNELKVQNQKEQLEQLQDYVTTLESLHREMRVFRHDYVNILSTLVGYIDNN-----DMPGLKYYFENNIVPINKTIESNNYKISLLQNIH---------VIELKGLLAVKLIRAQELKIDAILEVVEPIDKISMDSIDLCKVVGILLDNAVEAALTCENPVIRIAFVKKGDSIIIVFANSLPV-NMPPIYKIFEEGFSTKGEGRGLGLASLREIMK-KYSHVALDTKV--TDREVIQELEIM |
| 3A0R Chain:A ((128-344)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RLSILGEMTARVAHEIRNPITIIGGFIMRMKKHLDDPETLKKYINIIT-NELSRLETIVKEILEYSKERVLEFTEFNLNELIREVYVLFEEKIRKMNIDFCFETDNEDLRVEADRTRIKQVLINLVQNAIEATGE--NGKIKITSEDMYTKVRVSVWNSGPPIPEELKEKIFSPFFTT------LGLSICRKIIEDEHGG-KIWTENRENGVVFIFEIPK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A0R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75732 for 1309 contacts (-57.9/contact) +
2D Compatibility (PS) -19988 + (NN) -1033 + (LL) 24660
1D Compatibility (HY) -3600 + (ID) 2050
Total energy: -77743.0 ( -59.39 by residue)
QMean score : 0.326
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