Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------MKIDLEQIYILDFTMGLRF-HPLIIRKNLPLLYVAFIFLIWIQGVVMAGLPGDFDTTELDVLLAAIPALPLLILYPKKMAMKFQNVQYLLYVCFN
1Q60 Chain:A ((1-99))
GSSGSSGLKQKVENLFNEKCGEALGLKQAVKVPFALFESFPEDFYVEGLPEGVPFRRPSTFGIPRLEKILRNKAKIKFIIKKPEMFETAIKESSGPSSG---
General information:
TITO was launched using:
RESULT:
Template:
1Q60.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86295 for 613 contacts (-140.8/contact) +
2D Compatibility (PS) -9423 + (NN) -1087 + (LL) 108
1D Compatibility (HY) -400 + (ID) 550
Total energy: -97647.0 ( -159.29 by residue)
QMean score : 0.102
(partial model without unconserved sides chains):
PDB file :
Tito_1Q60.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q60-query.scw
PDB file :
Tito_Scwrl_1Q60.pdb
: