Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQVLVLPENKDINYIKTVQEVKRFFADFERFRMITGLSKKPHLLRNGFLEEPQFEPVAFSARHNKEVILEARWLVEKYTEMLNQMDDLYRTILMECYVERKQDVAVMMDLPYEIAQFKRIKKRAVLELATLMGILVRK
3WX4 Chain:A ((1-98))
---MIIDSQSVVQYTFKIDILEKLYKF---------LPNLYHSIVNELVEELHLENNDFLIGTYKDLSKAGYFYVIPAPG--KNIDDVLKTIMI--YVHD-----------YEIEDYFELEHHHH-------------
General information:
TITO was launched using:
RESULT:
Template:
3WX4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32976 for 604 contacts (-54.6/contact) +
2D Compatibility (PS) -9872 + (NN) 4573 + (LL) 4536
1D Compatibility (HY) -9600 + (ID) 950
Total energy: -44289.0 ( -73.33 by residue)
QMean score : 0.393
(partial model without unconserved sides chains):
PDB file :
Tito_3WX4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WX4-query.scw
PDB file :
Tito_Scwrl_3WX4.pdb
: