Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------------------------------------------MEYKNGENRIYAVNDEGVEVGEVTFVPT---GED--MFIIDHTGVDDAARGQGIAQELVKRAVEKAKSEGKKIVPLCPFAKAEFSKKPEYQEVEASK-------------------------------------------
4RS2 Chain:A ((9-188))
HHTDPALRALIRVEIPIDAPGIDALLRRSFESDAEAKLVHDLREDGFLTLGLVATDDEGQVIGYVAFSPVDVQGEDLQWVGMAPLAVDEKYRGQGLARQLVYEGLDSLNEFGYAAVVTL--GDPALYSRFGFELAAHHDLRCRWPGTESAFQVHRLADDALNGVTGLVEYHEHFNRFGLCGR
General information:
TITO was launched using:
RESULT:
Template:
4RS2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20127 for 553 contacts (-36.4/contact) +
2D Compatibility (PS) -10242 + (NN) -8303 + (LL) -8
1D Compatibility (HY) -3200 + (ID) 1150
Total energy: -43030.0 ( -77.81 by residue)
QMean score : 0.615
(partial model without unconserved sides chains):
PDB file :
Tito_4RS2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RS2-query.scw
PDB file :
Tito_Scwrl_4RS2.pdb
: