Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNESNGSMELYLREHTEEIINNWLSKIYENTYTSFVYSPQYKDELRADSEQTADLIISYFAGKKAFFEKLDKWLDNMYARRMENEVPLPEVITTLDKLRREFVTAVGDFCIHNDEVSKCEFSSSMAMVNHGFDRINEAFSAMYYNDIVKHLEQQHRLIEEISTPVISITDKLAILPLMGRVDRERAEKLSEITANKCV--------------------------------------HLGVEQLCIDLSGITYFDDALGEMLTNLVTMLKLLGVEAFISGIQPKMAQQINRVDLNLSIPAYHSLKAVLQDQTRTI |
3AGD Chain:A ((323-448)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------EGDRVFLHLQGVIRFGGAEAVLDALTDLRTGWDAAVYPRWQEAAADRAALSAATGGGAVHEAAAAAANDGPIRTVVLNLARVDRIDDVGRRLIAEGVRRLQADGVRVEVEDPERIL------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3AGD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -61570 for 524 contacts (-117.5/contact) +
2D Compatibility (PS) -8513 + (NN) -4139 + (LL) 15480
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -61342.0 ( -117.06 by residue)
QMean score : 0.404
|
|
|