Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVGMTRKKTLFWLCIFLLPNLLGFLIFIAIPILGSLGISFTDWDLVSTIHF------TGFENYKRLFNDPEFWKSFRNTITF-IIGYLPSVMILGLACALMLNQKIKLRPFFRAVYFLPVITSWVAVSLVWKWLFNPSYGLINYFLSLIGIAGPNWLTDPQTAMIAVIITSAWKDIGFVMVLFLGGLQNISPSYYEAANMDGASKLRQLFSITIPLLTPTTFFVTIISLINSFQVFDQVMIMTEGGPSGATMTLVQNI--------YNHAFRYFEMGYASAMSWILFIVIFIITIIQNKLQKRWSNY |
| 4TQU Chain:N ((2-284)) | LATPFYSRSDRIFGIVNAVLLGIFALCALYPIIYIFSMSISSGAAVTQGRVFLLPVDIDFSAYGRVLHDKLFWTSYANTIFYTVFGVVTSLIFIVPGAYALSKPRIRGRRVFGFIIAFTMWFNA---------------GMIPFFLNMRDL----GLLDNRFGILIGFACN-----AFNIILMRNYFESISASFEEAARMDGANDLQILWKVYIPLAKPALATITLLCAISRWNGYFWAMVLLRAEEKIPLQVYLKKTIVDLNVNEEFAGALLTNSYSMETVVGAIIVMSIIPVIIVYPVVQKYFTK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TQU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194671 for 1817 contacts (-107.1/contact) +
2D Compatibility (PS) -27072 + (NN) -1117 + (LL) 1640
1D Compatibility (HY) -18800 + (ID) 2600
Total energy: -242620.0 ( -133.53 by residue)
QMean score : 0.263
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