Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LLFDTHVHLNDEAFDDDIEEVIKRAQENDVTRMAVVGFNKETIDRALELAEKYD-FISLIVGWHPTDAITF---TDEDLEWLRDLALT--HPKVVALGEMGLDYHWDTS----PKETQFEVFRKQIRLAKEVNLPIVIHNREATEDVVRILQEEHAEEVGGIMHCFGETVEVMEACLAMNFYISFGGTVTFKNAKLPKIAAQAIPIDRLLIETDAPYLAPTPNRGKRNEPGYVKLVAEKIAELKEMKYSEIATHSTENAKRLFRIKD |
| 2Y1H Chain:A ((5-267)) | GLVDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYNGFVLPCLGVHPVQ----RSVTLKDLDVALPII-ENYKDRLLAIGEVGLDFSPRFAGTGEQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQ--GAEKVLLHAFDGRPSVAMEGVRAGYFFSIPPSIIRS--GQKQKLVKQLPLTSICLETDSPALGPEK--QVRNEPWNISISAEYIAQVKGISVEEVIEVTTQNALKLFPKLR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y1H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152053 for 2203 contacts (-69.0/contact) +
2D Compatibility (PS) -26823 + (NN) -17195 + (LL) 980
1D Compatibility (HY) -17200 + (ID) 3600
Total energy: -215891.0 ( -98.00 by residue)
QMean score : 0.558
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