Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKTIASIKTNLDSRLGKALTLKANG------------------GRKKTIERCGILAETYP--------------SVFIVELDQDENNFERVSY------SYTDILTDAVELVFTDD-NKELAL---
1WIJ Chain:A ((162-288))
SQFVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTPPPWWPTGNEEWWVKLGLPKSQSPPYRKPHDLKKMWKVGVLTAVINHMLPDIAKIKRHVRQSKCLQDKMTAKESAIWLAVLNQEESLIQQ
General information:
TITO was launched using:
RESULT:
Template:
1WIJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7888 for 482 contacts (-16.4/contact) +
2D Compatibility (PS) -8943 + (NN) -1666 + (LL) 0
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -21047.0 ( -43.67 by residue)
QMean score : 0.286
(partial model without unconserved sides chains):
PDB file :
Tito_1WIJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WIJ-query.scw
PDB file :
Tito_Scwrl_1WIJ.pdb
: