Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKISITAPAKINLSLDALYKREDGYHEVEMVMT---TIDLADRLYLERLDEDKIVLDVKAHFIPEDRRNLIYQAALLLKKRFD------VKMGVRITIDKHIPVSAGLAGGSSDAAAALKGLNVIWELGLSIEELAEISSEIGSDIAFCVYGGTALATGRGEKISALPNIPGCWIVLAKPSISVSTPTIYKELQVDNVEH-PDTQKMIESIKNGDLDGIFAATGNVLESVTLEKNPQVKRIKDRMLAFGAEAALMSGSGPTVFALIKQYSRAKRVYNGLRGFCEEVYMVRPWSEGENDTNINY |
| 2WW4 Chain:A ((1-264)) | MRTQWPSPAKLNLFLYITGQRADGYH---TLQTLFQFLDYGDTISIELRDDGDIRLLTPVEGV-EHEDNLIVRAARLLMKTAADSGRLPTGSGANISIDKRLPMGGGLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEILTPVDP-PEKWYLVAHPGVSIPTPVIFKDPELPRNTPKRSIETLLKCEFSNDCEVIAR-----------KRFREVDAVLSWLLE-Y-APSRLTGTGACVFAEFDTESEARQVLEQAPEW--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121946 for 2061 contacts (-59.2/contact) +
2D Compatibility (PS) -27103 + (NN) -6526 + (LL) 2652
1D Compatibility (HY) -15600 + (ID) 4150
Total energy: -172673.0 ( -83.78 by residue)
QMean score : 0.427
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