Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MITF-------DQLDTELQALENPNTIKIFRNHGCPDSLDLYG-LKIGDLKKIIRREKLTKNHELAVKLIESNNSDLIYLGLLAINPNKITTEQIEKWNIAFRETWSQLTFGLASIVSKRDDALLFAKTWIESDYDLTKSMGWQIYSEHINNLPEAETLLQRAKETLQTETNRTRYSMNGFIITCGIYKDDLHEKAMEAAKSVGKVHVNLGNTACKVPDAISYIEKARNRTK |
| 2R0Q Chain:C ((1-200)) | MIIGYARVSSLDQNLERQLENLKTFGAEKIFTEKNRPILQKALNFVRMGDRFIVESIDRLGRNYNEVIHTVNYLKDKEVQLMITSLPMMNEVIG-----NPLLDKFMKDLIIQILAMVSEQER----------------------------------NESKRRQAQGIQVAKEKGVYKGRPLLYSPN-AKDPQKRVIYHRVVEMLEEGQAISKIAKEVNITRQTVYRIKHDNG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R0Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9590 for 1168 contacts (-8.2/contact) +
2D Compatibility (PS) -19484 + (NN) -6435 + (LL) 3436
1D Compatibility (HY) -4800 + (ID) 1200
Total energy: -38073.0 ( -32.60 by residue)
QMean score : 0.283
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