Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLKKWKRDHLGMVMGILNVTPDSFSDGGKYMQVEEAVARALQMAEDGAAIIDVGGISTRPGFSEVTPDEELARIIPVIKAV--RTKLPDIWISVDSWRAEVAEQAILAGADMINDQWGAKKEPKIAEVAAKYDVPICLMHNRENAQYDNFLEDVKKDLLESIAIAKAASVPDEHIILDPGFGFVKTPAQNLEVLRRIDEIVALGYEVLLGTSRKSTIGLVLGTTPGDRMEGTGATTVYGFSKGCTITRVHDVLPIARMVRMTDAITGKLDITNL
4D9P Chain:B ((41-294))----------LIMGILNVT-----DGGSYNEVDAAVRHAKEMRDEGAHIIDIGGES-------VSVEEEIKRVVPMIQAVSKEVKLP---ISIDTYKAEVAKQAIEAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNRDNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILDPGIGFAKTPEQNLEAMRNLEQLNVLGYPVLLGTSRKSFIGHVLDLPVEERLEGTGATVCLGIEKGCEFVRVHDVKEMSRMAKMMDAMIGK------


General information:
TITO was launched using:
RESULT:

Template: 4D9P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136908 for 2058 contacts (-66.5/contact) +
2D Compatibility (PS) -27014 + (NN) -17745 + (LL) 1240
1D Compatibility (HY) -26000 + (ID) 7200
Total energy: -213627.0 ( -103.80 by residue)
QMean score : 0.501

(partial model without unconserved sides chains):
PDB file : Tito_4D9P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4D9P-query.scw
PDB file : Tito_Scwrl_4D9P.pdb: