Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNLFLTSSFKDVVPLFTEFESNLQGK-----TVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELDIATESLGEITTKLRKNDFIYVTGGNTFFLLQELKRTGADKLILEEIAAGKLYIGESAGAVITSPNIAYIQTMDSTKKAVNLTNYDALNLVDFSTLPHYNNTPFKEITQKIVTEYAGKSQIYPISNHEAIFIRGKEVITKRLS--------------------
1FYE Chain:A ((1-229))
MELLLLSNSTLPGKAWLEHALPLIANQLNGRRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVTGIHRVADPLAAIEK----AEIIIVGGGNTFQLLKESRERGLLAPMADRVKRGALYIGWSAGANLACPTIRTTNDMPIV----DPNGFDALDLFPLQINPHFTNTREQRIRELLVVA--PELTVIGLPEGNWIQVSNGQAVLGGPNTTWVFKAGEEAVALEAGHRF
General information:
TITO was launched using:
RESULT:
Template:
1FYE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103034 for 1656 contacts (-62.2/contact) +
2D Compatibility (PS) -20892 + (NN) -6881 + (LL) 1104
1D Compatibility (HY) -10000 + (ID) 2450
Total energy: -142153.0 ( -85.84 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_1FYE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FYE-query.scw
PDB file :
Tito_Scwrl_1FYE.pdb
: