Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFTSYFLTFEDGARLEIMSRTDVTGKTTGENL-GWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGNRIEITW
2KJZ Chain:A ((3-119))
-HPDFTILYVDNPPASTQFYKALLGVDPVESS---P-TF-S-LFVLANGMKLGLWSRHT-VE-PKASVTGGGGELAFRVENDAQVDETFAGWKASGVAMLQQPAKMEFG-YTFTAADPDSHRLRVYA
General information:
TITO was launched using:
RESULT:
Template:
2KJZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46958 for 777 contacts (-60.4/contact) +
2D Compatibility (PS) -13097 + (NN) -8610 + (LL) 852
1D Compatibility (HY) -2800 + (ID) 1250
Total energy: -71863.0 ( -92.49 by residue)
QMean score : 0.529
(partial model without unconserved sides chains):
PDB file :
Tito_2KJZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KJZ-query.scw
PDB file :
Tito_Scwrl_2KJZ.pdb
: