Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKGLKKMKYSIQFSDAIHILAYIEIFKNTNLLSSEIIAGSVK-TNPANIRRIMSNLKKANLITTQTGKAN-PILTKPPEEISLLDVYKSIEGNTNLIHVDPKTNPDCIVGANIQQVLSSKYELLQQKIELEMDEIKLDSIIHDISVLESKDRPQNNEFITKFL
3EYI Chain:A ((14-67))
-----------------DIYRFLKD---NGPQRALVIAQALGMRTAKDVNRDLYRMKSRHLLDMD-EQSKAWTIY----------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3EYI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36632 for 334 contacts (-109.7/contact) +
2D Compatibility (PS) -5461 + (NN) -1240 + (LL) 7536
1D Compatibility (HY) -3200 + (ID) 300
Total energy: -39297.0 ( -117.66 by residue)
QMean score : 0.650
(partial model without unconserved sides chains):
PDB file :
Tito_3EYI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EYI-query.scw
PDB file :
Tito_Scwrl_3EYI.pdb
: